The Virtual Brain

Profound science.

Peer-reviewed.

If you've usedThe Virtual Brain software for your scientific publication, please use the paper below for your citation list:

Paula Sanz Leon, Stuart A. Knock, M. Marmaduke Woodman, Lia Domide, Jochen Mersmann, Anthony R. McIntosh, Viktor Jirsa

The Virtual Brain: a simulator of primate brain network dynamics

Frontiers in Neuroinformatics 7:10. doi: 10.3389/fninf.2013.00010

  • Jun

    2017

    eNeuro

    doi.org/10.1523/ENEURO.0111-17.2017

    Melozzi F, Woodman MM, Jirsa VK and Bernard C

    The Virtual Mouse Brain: A Computational Neuroinformatics Platform to Study Whole Mouse Brain Dynamics

  • Jun

    2017

    Scientific Reports, 7: 3095

    doi:10.1038/s41598-017-03073-5

    Deco G, Kringelbach ML, Jirsa VK & Ritter P

    The dynamics of resting fluctuations in the brain: metastability and its dynamical cortical core

  • May

    2017

    Neuron

    doi.org/10.1016/j.neuron.2017.05.013

    Pillai AS and Jirsa VK

    Symmetry Breaking in Space-Time Hierarchies Shapes Brain Dynamics and Behaviour

  • Apr

    2017

    bioRxiv

    doi: http://dx.doi.org/10.1101/123406

    Melozzi F, Woodman MM, Jirsa VK, Bernard C

    The Virtual Mouse Brain: a computational neuroinformatics platform to study whole mouse brain dynamics

  • Feb

    2017

    Brain, 2017

    doi:10.1093/awx018

    Proix T, Bartolomei F, Guye M, Jirsa VK

    Individual brain structure and modelling predict seizure propagation

  • Feb

    2017

    Human Brain Mapping, 2017

    https://dx.doi.org/10.1002/hbm.23506

    Bezgin G, Solodkin A, Bakker, Ritter P, McIntosh AR

    Mapping complementary features of cross-species structural connectivity to construct realistic "Virtual Brains"

  • Dec

    2016

    bioRxiv

    http://dx.doi.org/10.1101/065284

    Deco G, Kringelbach, Jirsa VK, Ritter P

    The dynamics of resting fluctuations in the brain: metastability and its dynamical core

  • Nov

    2016

    Neuroimage, 2016

    doi: 10.1016/j.neuroimage.2016.06.016

    Prix T, Spiegler A, Schirner M, Rothmeier S, Ritter P, Jirsa VK

    How do parcellation size and short-range connectivity affect dynamics in large-scale brain network models?

  • Sep

    2016

    e-Neuroforum, 2016

    doi:10.1007/s13295-016-0027-1

    Stefanovski L, Ghani A, McIntosh AR, Ritter P

    Linking connectomics and dynamics in the human brain: Big data need big theories!

  • Apr

    2016

    Neuroimage, 2016

    doi:10.1016/j.neuroimage.2016.04.049

    Jirsa VK, Proix T, Perdikis D, Woodman MM, Wang H, Gonzalez-Martinez J, Bernard C, BĂ©nar C, Guye M, Chauvel P, Bartolomei F

    The Virtual Epileptic Patient: Individualized whole-brain models of epilepsy spread

  • Mar

    2016

    eneuro. Mar 2016;3(2)

    doi:10.1523/ENEURO.0158-15.2016

    Falcon MI, Riley JD, Jirsa VK, McIntosh AR, Shereen AD, Chen EE, Solodkin A

    Functional mechanisms of recovery after chronic stroke: modelling with The Virtual Brain

  • Feb

    2016

    Neuroimage, 2016

    doi:10.1016/j.neuroimage.2016.02.015

    Kunze T, Hunold A, Haueisen J, Jirsa VK, Spiegler A

    Transcranial direct current stimulation changes resting state functional connectivity: A large-scale brain network modelling study

  • Nov

    2015

    Front Neurol. 2015 Nov 2;6:228

    doi: 10.3389/fneur.2015.00228. eCollection 2015. PubMed PMID: 26579071; PubMed Central PMCID: PMC4629463

    Falcon MI, Riley JD, Jirsa V, McIntosh AR, Shereen AD, Chen EE, Solodkin A

    The Virtual Brain: Modeling Biological Correlates of Recovery after Chronic Stroke

  • Nov

    2015

    Front Neuroinform. 2015 Nov 25;9:27

    doi: 10.3389/fninf.2015.00027. eCollection 2015. PubMed PMID: 26635597; PubMed Central PMCID: PMC4658631

    Matzke H, Schirner M, Vollbrecht D, Rothmeier S, Llarena A, Rojas R, Triebkorn P, Domide L, Mersmann J, Solodkin A, Jirsa VK, McIntosh AR, Ritter P

    TVB-EduPack - An Interactive Learning and Scripting Platform for The Virtual Brain

  • Aug

    2015

    PLoS Computational Biology

    doi:10.1371/journal.pcbi.1004352

    Becker R, Knock S, Ritter P, Jirsa V

    Relating alpha power and phase to population firing and hemodynamic activity using a thalamo-cortical neural mass model

  • Aug

    2015

    Neuroimage, 2015 Aug 15;117:343-357

    doi:10.1016/j.neuroimage.2016.03.055

    Schirner M, Rothmeier S, Jirsa VK, McIntosh AR, Ritter P

    An automated pipeline for constructing personalized virtual brains from multimodal neuroimaging data

  • Jul

    2015

    Trends in Cognitive Science, 19(10): 616-628

    doi:10.1016/j.tics.2015.07.011

    Kringelbach M, McIntosh AR, Ritter P, Jirsa V, Deco G.

    The rediscovery of slowness: exploring the timing of cognition

  • Jun

    2015

    J Neurosci. 2015 Jun 10;35(23):8914-24

    doi: 10.1523/JNEUROSCI.4560-14.2015. PubMed PMID: 26063923; PubMed Central PMCID: PMC4589568

    Adhikari MH, Raja Beharelle A, Griffa A, Hagmann P, Solodkin A, McIntosh AR, Small SL, Deco G

    Computational modeling of resting-state activity demonstrates markers of normalcy in children with prenatal or perinatal stroke

  • Jun

    2015

    Front Comput Neurosci. 2015 Jun 23;9:77

    doi: 10.3389/fncom.2015.00077. eCollection 2015. PubMed PMID: 26157384; PubMed Central PMCID: PMC4477138

    Ritter P, Jirsa VK, McIntosh AR, Breakspear M

    Editorial: State-dependent brain computation

  • May

    2015

    Neuroimage. 2015 May 1;111:385-430

    doi: 10.1016/j.neuroimage.2015.01.002. Epub 2015 Jan 13. PubMed PMID: 25592995

    Sanz-Leon P, Knock SA, Spiegler A, Jirsa VK

    Mathematical framework for large-scale brain network modeling in The Virtual Brain

  • Dec

    2014

    Brain Connect. 2014 Dec;4(10):791-811

    doi:10.1089/brain.2014.0252. PubMed PMID: 25131838

    Roy D, Sigala R, Breakspear M, McIntosh AR, Jirsa VK, Deco G, Ritter P

    Using The Virtual Brain to reveal the role of oscillations and plasticity in shaping brain's dynamical landscape

  • Mar

    2014

    Front Comput Neurosci 8: 36

    doi:10.3389/fncom.2014.00036

    Sigala, R, Haufe S, Roy D, Dinse HR, Ritter P.

    The role of alpha-rhythm states in perceptual learning: insights from experiments and computational models

  • Mar

    2014

    Front. Neuroinform. 8:36

    doi: 10.3389/fninf.2014.00036

    Woodman MM, Pezard L, Domide L, Knock S, Sanz Leon P, Mersmann J, McIntosh AR, Jirsa VK

    Integrating Neuroinformatics Tools in The Virtual Brain

  • Jun

    2013

    Neuroimage. 2013 Jun 3;83:704-725

    doi:10.1016/j.neuroimage.2013.06.018

    Spiegler A, Jirsa VK

    Systematic approximations of neural fields through networks of neural masses in The Virtual Brain

  • Apr

    2013

    Brain Connect 3(2): 121-145

    doi:10.1089/brain.2012.0120

    Ritter, P., M. Schirner, A. R. McIntosh and V. K. Jirsa

    The Virtual Brain integrates computational modeling and multimodal neuroimaging