Published:2020-11-24 01:00:00.0
Tutorial on how to use the TVB-NEST toolbox co-simulation in HBP collab
byMichael Burgstahler
Published:2020-11-23 01:00:00.0
Tutorial on how to use TVB-NEST toolbox on your local computer
byMichael Burgstahler
Published:2020-11-22 01:00:00.0
An overview of The Virtual Brain integrated workflows on EBRAINS
Topics covered in this lesson by Petra Ritter
- Intro to TVB
- Running simulations with TVB
- Security of personal data
- Collaboration tools (jupyter notebooks)
- TVB datasets on EBRAINS
byMichael Burgstahler
Published:2020-11-21 01:00:00.0
An overview of The Virtual Brain simulator and it's integration into the Human Brain Project Cloud and EBRAINS infrastructure
Topics covered in this lesson by Lia Domide
- Technical stack
- Packages
- TVB in HBP @ CSCS
- Plans & next steps
byMichael Burgstahler
Published:2020-11-15 01:00:00.0
An overview of the EBRAINS integrated Fast TVB, a C implementation of TVB that is orders of magnitude faster than the original Python TVB, and capable of performing parallelizable simulations in the cloud.
Topics covered in this lesson by Michael Schirner
- What is Fast TVB
- Jupyter notebook review
- Data formats
- API
- Software maturity, integration, testing, versioning & deployment
byMichael Burgstahler
Published:2020-11-14 01:00:00.0
An overview of the process of developing the TVB-NEST co-simulation on the EBRAINS infrastructure, and its use cases
Topics covered in this lesson by Dionysios Perdikis
- Motivation; Software structure
- Default workflow
- EBRAINS collaboratory
- Use cases
- Modifications to the TVB simulator
- Benchmarking
- Parameters exploration
- Future work
byMichael Burgstahler
Published:2020-11-13 01:00:00.0
An overview of the multi-scale co-simulation between TVB-NEST and Elephant on the EBRAINS infrastructure
Topics covered in this lesson by Wouter Klijn
- Alpha release workflow
- Co-simulation of NEST & TVP using Elephant
- Multiscale simulation design
- Motivation for this method
byMichael Burgstahler